Everything you need to get the most out of your NiDB instance.
Official documentation for the NiDB platform — installation, configuration, administration, and user guides.
The complete NiDB documentation hub, including all guides and reference material.
New to NiDB? Start here — a walkthrough of key concepts, navigation, and your first data upload.
Step-by-step instructions for researchers: managing subjects, visits, data series, and studies.
For instance administrators: user management, access control, system settings, and data governance.
REST API reference, pipeline integrations, and connecting NiDB to external analysis tools.
The home of the NiDB open-source project, including downloads, releases, and community links.
Steps specific to Squirrel Research customers after your instance has been provisioned.
After your Order Form is signed and your instance is provisioned, you'll receive an email with your instance URL, admin credentials, and setup checklist.
Log in as administrator, set up your study structure, create user accounts, and configure access permissions. Use the NiDB Administrator Guide for reference.
Upload existing neuroimaging or research data using NiDB's import tools. Our support team can assist with bulk data migration from other systems.
Add researchers, coordinators, and collaborators as Authorized Users. Assign roles and study-level access permissions to match your lab's workflow.
NiDB supports DICOM, NIfTI, EEG, and other formats. Data can be uploaded via the web interface, automated scripts, or direct pipeline integration.
View Guide →Administrators can create, modify, and deactivate user accounts, assign roles, and control access to individual studies from the admin panel.
View Guide →NiDB integrates with analysis pipelines including FreeSurfer, FSL, and custom scripts. Set up automated pipelines to run on incoming data.
View Guide →Share datasets with internal collaborators or external institutions using NiDB's controlled sharing and data transfer features.
View Guide →Export your data in standard formats at any time. Your data is always portable and never locked into our platform.
View Guide →Can't find what you need in the docs? Reach out to our support team. Response times depend on your subscription plan.
Contact Support →